Browse of TCMCG019C43436 protein

CDS

Accession Number	TCMCG019C43436
gbkey	CDS
Protein Id	XP_022932967.1
Location	join(406125..406444,406745..406891,407432..407585,412186..412321,413594..413739,415084..415179,415428..415480,417049..417180,417304..417355,417556..417675,418359..418490,419248..419376,419456..419533,420382..420522,423140..423234,423766..423962,424996..425774,426471..426551,426647..426712,426809..426886,428601..428828,431198..431329,431486..431662,432003..432188,432310..432692,433323..433437)
Gene	LOC111439584
GeneID	111439584
Organism	Cucurbita moschata

Protein

Length	1450aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA418582
db_source	XM_023077199.1
Definition	cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucurbita moschata]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGTTTTGCCGCTTATAGAATGATGCACTGCCCTACGGGCATCGAGAATTGTGATTCAGGCTTTATCACGCATTCTCGCTCCGATTTCGTACCCCGCGTCACTTCTCACGCCGACGACCTTGAGTCCGATTGGCCGCCGCGCCGAGAAATTGGTCCGGTTCCGAATCTCGTTGTCACCGCCGGTAATGTCCTTGAGGTATATGTTGTCAGGGTTCAAGAAGATGGTGGCAAAGAATCAAGAAGCTCTGGAGAAGTCAGACGGGGTGGCATTATGGATGGAGTCTCTGGGGCCTCGCTCGAGCTTGTTTGCCACTATAGGTTGCACGGTAATGTTGAGTCCATGGTAATTTTGTCTAGTAGAGGAGGTGATGGTTCCAAGAAGAGAGATTCGATCATATTAGTCTTTAAAGAAGCAAAAATTTCAGTGCTAGAGTTTGATGATTCTATCCATAGTCTCCGTACAAGCTCAATGCATTGCTTTGAGGGTCCACAATGGCTTCATTTGAAAAGAGGTCGTGAATCATTTGCAAGAGGTCCAGTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGAGGAGTTCTTGTTTATGGTTTGCAAATGATAATACTTAAGGCTTCTCAGGCTGGTTCCGGTTTGGTTGTGGATGATGAAGCTTGCGGTAACGTAGGTGCAAGTTCTGCTCGAGTTGAATCGTCATACCTAATTAACCTAAGGGATTTGGATGTGAAGCATGTAAAGGATTTTGTATTTGTACATGGTTATATTGAACCTGTGATGGTGATCCTCCATGAGCAGGAACTTACCTGGGCCGGCCGTGTTGCATGGAAGCATCACACGTGTATGATTTCTGCGCTAAGTATTAGCACAACCTTGAAGCAGCATCCTCTAATATGGTCTGCCAATAACCTTCCTCATGATGCTTACAAGCTACTTGCGGTGCCATCACCAATTGGTGGAGTACTTGTTGTCAGTGCAAATAGTATTCATTATCTCAGTCAGTCAGCTTCATGCATGCTGGCTTTGAATAATTATGCTGTTTCCCCTGATAGCAGTCAAGATATGCCTAGATCAAATTTCAATGTGGAATTGGATGCTGCCCATGCTACATGGTTGCTAAATGATGTGGCCTTGCTGTCAACCAAAACTGGGGAACTATTATTGCTGGCACTTGTCTATGATGGACGTGTTGTGCAGAGACTTGATCTTTCGAAGTCTAAAGCTTCAGTACTTACATCGGGCATTGCATCAATTGGAAGTTCATTATTTTTTCTGGGCAGTCGATTGGGAGATAGTTTGCTTGTACAGTTTAGTTGTGGAGTGGGATCCTCAGGATTGGCATCCAGTCTAAAGGACGAGGTTGGAGATATTGAAGTTGATGCTCCAACATCAAAGAGAATGCGTAGATCATCTTCTGATGCTCTACAAGATATGGTTGGAGGGGATGAGCTATCGTTGTACGGTGTTTCAAATAATACGGAATCTGCTCAGAAAAGCTTTTCTTTCGCTGTTAGAGACTCATTGATCAATATTGGGCCTCTGAAGGACTTTTCCTACGGTTTAAGAATTAATGCAGATGCTAATGCCACTGGAATTGCCAAACAAAGCAATTATGAACTAGTTTGTTGTTCGGGTAATGGTAAAAATGGTGCATTATGTATTCTTCGGCAGTCAATTCGCCCTGAAATGATTACTGAGGTTGAGCTCCCAGGTTGTAAAGGCATTTGGACTGTTTACCACAAAAATACTCGTGGTAGTAGTGCTGATTCTTCTAGAATGCTTTCAGATGATGATGAGTATCATGCATATTTGATTATAAGCCTTGAGGCTCGCACAATGGTACTTGAAACTGGAGATCTCCTAACAGAAGTCACTGAGAGTGTTGATTACTTTGTGCAAGGGAGAACAATTGCTGCGGGCAACTTGTTTGGAAGGCGTCGAGTTATCCAGGTCTATGAAACTGGTGCACGAGTTTTGGATGGGTCTTTTATGACTCAAGATTTGAACTTGGTAGTCCCTGGCAATGAATCTGGTAATGGTCCTGAAGGTTGTACTGTGTTGTCTGCATCTATTAGTGATCCATATGTCTTGCTGACTATGACGGATGGAAGTATTCGATTACTTGTTGGAGATCCTTCTTCTTGCTCTGTTTCTGTATCTGCACCAGCCGCCTTTGGGAGTTCAAAAAAGTGTGTATCTTGTTGCACTCTTTACCATGATAAGGGCATTGAGCCTTGGCTTCGGATGACAAGTACAGATGCATGGCTTTCTACAGGAGTTGGGGAGACAATTGATGGTACTGATGGCTCACTCCAAGATCAGGGTGACATATATTGTGTTGCTTGTTACGATAGTGGGGACCTTGAAATATTTGATGTGCCTAATTTCACCAGCGTTTTCTATGTGGATAAATTTGTTTCTGGAAAATCACATTTAGTTGATTTTCAAATATCAGACTCACAGAAAAGTTCTGAGAGGTTGGATGGAAATTCTCAGGAATTGAATAACAATGGTAGGAATGAAAGTTCACAAAATATGAAGGTCACTGAGGTAGCCATGCAGAGGTGGTCAGGGCAGCATAGCCGCCCATTTCTTTTTGGGATATTGACAGACGGGACAATTCTTTGTTACCATGCTTATTTATTTGAGAGTTCAGACACTGCCTCTAAAATTGATGATTCTGTTTCTATGGAAAATAGCTCAAGTAATATGAGTTCTTCTAGATTAAGAAATTTGAGATTTCTTCGTGTCCCCTTGGACATACAAGGAAGGGATGATATGCCAAATGGAGCATTGTCCCGTAGATTATCTATTTTCAAGAATATTTCTGGTTACCAGGGGTTATTTCTTTGTGGGTCAAGACCTGCTTGGTTTATGGTATTTAGAGAACGCCTTCGAATTCATCCTCAGCTATGTGATGGACCCATCGTTGCCTTTACAGTGCTACATAATGTCAACTGTAACCATGGACTTATATATGTCACGTCACAGGGTGTTTTAAAGATTTGTCAACTTCCATCTACATCAAACTATGATAATTACTGGCCGGTACAGAAAGTTCCATTGAAAGGAACACCACACCAGGTCACCTACTTTCACGAGAAGAATCTGTACCCCGTTATAATTTCAGCACCTGTTCATAAGCCGTTGAATCAAGTGCTTTCATCTATGGTTGATCAAGATGCTGGTCACGTTGAGAATCATAACTTGAGTGCTGATGAACTGCAGCAAACTTACTCAGTGGAAGAGTTTGAGATTCGGATTTTGGAACCAGAAAAGTCTGGTGGCCCTTGGCAAACTAGGGCTACAATTGCTATGCACAGTTCTGAAAACGCCCTTACCATTCGCGTTGTTACACTTTTGAACACAACCACAAAAGAGAATGAAATACTTTTAGCAGTTGGAACTGCATATGTGCAAGGGGAGGATGTTGCTGCAAGAGGAAGAGTGCTTTTATTTTCAGTTGGAAAAGATGCTGATAATTCGCAGACCTTGGTTTCAGAGGTTTATTCGAAAGAATTGAAGGGTGCTATTTCTGCTTTAGCCTCTCTGCAAGGTCATCTATTGATAGCTTCTGGTCCTAAAATAATCTTACACAAGTGGACTGGTGCAGAGTTGAATGGCATTGCGTTTTACGACGTTCCACCCTTATATGTTGTGAGCTTGAACATTGTCAAGAATTTCATACTTCTTGGTGATATACACAAGAGCATTTACTTTCTGAGTTGGAAAGAACAGGGAGCTCAACTTAGCTTGTTGGCGAAGGATTTTGGTTCTCTAGATTGCTTTGCAACAGAATTTCTGATCGATGGAAGCACTCTTAGTCTTACTGTCTCTGATGATCAAAAGAATATTCAGATATTTTATTATGCACCAAAGTCGACTGAGAGTTGGAAAGGGCAGAAGCTTCTATCAAGAGCTGAATTTCATGTGGGTGCTCATGTGACGAAGTTTCTACGGCTACAAATGTTGTCGACCACCTCAGATAGAGGCAGTAGTACAGTTTCTGACAAGACCAATCGCTTCGCTTTGTTATTTGGCACCCTTGATGGAAGTATTGGTTGTATTGCACCTCTTGATGAACTCACATTTCGTAGACTGCAGTCATTACAAAAGAAGCTTGTTGATGCCGTTCCCCATGTCGGTGGTTTAAATCCAAGGTCGTTTCGCCAGTTTCATTCAAATGGAAAGGTTCATCGAAGTGGTCCAGACAGCATTGTCGATTGTGAATTACTATGCCACTACGAGATGATACCGTTGGAGGAGCAGCTTGAAATTGCTCAACAAATTGGGACAACTCGTTCGCAGATTCTCTCAAACTTAAATGACCTCTCTCTGGGAACAAGTTTCTTGTAA

Protein:   MSFAAYRMMHCPTGIENCDSGFITHSRSDFVPRVTSHADDLESDWPPRREIGPVPNLVVTAGNVLEVYVVRVQEDGGKESRSSGEVRRGGIMDGVSGASLELVCHYRLHGNVESMVILSSRGGDGSKKRDSIILVFKEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEACGNVGASSARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVAWKHHTCMISALSISTTLKQHPLIWSANNLPHDAYKLLAVPSPIGGVLVVSANSIHYLSQSASCMLALNNYAVSPDSSQDMPRSNFNVELDAAHATWLLNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLTSGIASIGSSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTSKRMRRSSSDALQDMVGGDELSLYGVSNNTESAQKSFSFAVRDSLINIGPLKDFSYGLRINADANATGIAKQSNYELVCCSGNGKNGALCILRQSIRPEMITEVELPGCKGIWTVYHKNTRGSSADSSRMLSDDDEYHAYLIISLEARTMVLETGDLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVYETGARVLDGSFMTQDLNLVVPGNESGNGPEGCTVLSASISDPYVLLTMTDGSIRLLVGDPSSCSVSVSAPAAFGSSKKCVSCCTLYHDKGIEPWLRMTSTDAWLSTGVGETIDGTDGSLQDQGDIYCVACYDSGDLEIFDVPNFTSVFYVDKFVSGKSHLVDFQISDSQKSSERLDGNSQELNNNGRNESSQNMKVTEVAMQRWSGQHSRPFLFGILTDGTILCYHAYLFESSDTASKIDDSVSMENSSSNMSSSRLRNLRFLRVPLDIQGRDDMPNGALSRRLSIFKNISGYQGLFLCGSRPAWFMVFRERLRIHPQLCDGPIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSTSNYDNYWPVQKVPLKGTPHQVTYFHEKNLYPVIISAPVHKPLNQVLSSMVDQDAGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENEILLAVGTAYVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDRGSSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVGGLNPRSFRQFHSNGKVHRSGPDSIVDCELLCHYEMIPLEEQLEIAQQIGTTRSQILSNLNDLSLGTSFL